Package qupath.lib.color

Enum Class ColorTransformer.ColorTransformMethod

java.lang.Object

java.lang.Enum<ColorTransformer.ColorTransformMethod>

qupath.lib.color.ColorTransformer.ColorTransformMethod

All Implemented Interfaces:

Serializable, Comparable<ColorTransformer.ColorTransformMethod>, Constable

Enclosing class:

ColorTransformer

public static enum ColorTransformer.ColorTransformMethod
extends Enum<ColorTransformer.ColorTransformMethod>

Enum consisting of color transforms that may be applied to RGB images.

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
Black	All pixels black
Blue	Blue channel only
Blue_chromaticity	Blue chromaticity value, blue / max(1, red + green + blue)
Blue_OD	Blue channel optical densities
Brightness	Brightness value (from RGB-HSB transform)
Brown	Brown value, (blue - (red + green)*0.3f)
DAB_H_DAB	DAB after color deconvolution with default H-DAB stains
DAB_H_DAB_8_bit	DAB after color deconvolution with default H-DAB stains and conversion to 8-bit
Eosin_H_E	Eosin after color deconvolution with default H&E stains
Eosin_H_E_8_bit	Eosin after color deconvolution with default H&E stains and conversion to 8-bit
Green	Green channel only
Green_chromaticity	Green chromaticity value, green / max(1, red + green + blue)
Green_divided_by_blue	Green value divided by blue value
Green_OD	Green channel optical densities
Hematoxylin_H_DAB	Hematoxylin after color deconvolution with default H-DAB stains
Hematoxylin_H_DAB_8_bit	Hematoxylin after color deconvolution with default H-DAB stains and conversion to 8-bit
Hematoxylin_H_E	Hematoxylin after color deconvolution with default H&E stains
Hematoxylin_H_E_8_bit	Hematoxylin after color deconvolution with default H&E stains and conversion to 8-bit
Hue	Hue value (from RGB-HSB transform)
OD_Normalized	RGB values normalized to OD vector (to reduce intensity information)
Optical_density_sum	Sum of red, green and blue optical densities
Original	Original image
Red	Red channel only
Red_chromaticity	Red chromaticity value, red / max(1, red + green + blue)
Red_OD	Red channel optical densities
RGB_mean	Mean of red, green and blue channels
Saturation	Saturation value (from RGB-HSB transform)
Stain_1	First stain after color deconvolution
Stain_2	Second stain after color deconvolution
Stain_3	Third stain after color deconvolution
White	All pixels white

Method Summary

Modifier and Type	Method	Description
String	toString()
static ColorTransformer.ColorTransformMethod	valueOf(String name)	Returns the enum constant of this class with the specified name.
static ColorTransformer.ColorTransformMethod[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

Original

public static final ColorTransformer.ColorTransformMethod Original

Original image

Red

public static final ColorTransformer.ColorTransformMethod Red

Red channel only

Green

public static final ColorTransformer.ColorTransformMethod Green

Green channel only

Blue

public static final ColorTransformer.ColorTransformMethod Blue

Blue channel only

Red_OD

public static final ColorTransformer.ColorTransformMethod Red_OD

Red channel optical densities

Green_OD

public static final ColorTransformer.ColorTransformMethod Green_OD

Green channel optical densities

Blue_OD

public static final ColorTransformer.ColorTransformMethod Blue_OD

Blue channel optical densities

RGB_mean

public static final ColorTransformer.ColorTransformMethod RGB_mean

Mean of red, green and blue channels

Hue

public static final ColorTransformer.ColorTransformMethod Hue

Hue value (from RGB-HSB transform)

Saturation

public static final ColorTransformer.ColorTransformMethod Saturation

Saturation value (from RGB-HSB transform)

Brightness

public static final ColorTransformer.ColorTransformMethod Brightness

Brightness value (from RGB-HSB transform)

Stain_1

public static final ColorTransformer.ColorTransformMethod Stain_1

First stain after color deconvolution

Stain_2

public static final ColorTransformer.ColorTransformMethod Stain_2

Second stain after color deconvolution

Stain_3

public static final ColorTransformer.ColorTransformMethod Stain_3

Third stain after color deconvolution

Optical_density_sum

public static final ColorTransformer.ColorTransformMethod Optical_density_sum

Sum of red, green and blue optical densities

Hematoxylin_H_E

public static final ColorTransformer.ColorTransformMethod Hematoxylin_H_E

Hematoxylin after color deconvolution with default H&E stains

Eosin_H_E

public static final ColorTransformer.ColorTransformMethod Eosin_H_E

Eosin after color deconvolution with default H&E stains

Hematoxylin_H_DAB

public static final ColorTransformer.ColorTransformMethod Hematoxylin_H_DAB

Hematoxylin after color deconvolution with default H-DAB stains

DAB_H_DAB

public static final ColorTransformer.ColorTransformMethod DAB_H_DAB

DAB after color deconvolution with default H-DAB stains

Hematoxylin_H_E_8_bit

public static final ColorTransformer.ColorTransformMethod Hematoxylin_H_E_8_bit

Hematoxylin after color deconvolution with default H&E stains and conversion to 8-bit

Eosin_H_E_8_bit

public static final ColorTransformer.ColorTransformMethod Eosin_H_E_8_bit

Eosin after color deconvolution with default H&E stains and conversion to 8-bit

Hematoxylin_H_DAB_8_bit

public static final ColorTransformer.ColorTransformMethod Hematoxylin_H_DAB_8_bit

Hematoxylin after color deconvolution with default H-DAB stains and conversion to 8-bit

DAB_H_DAB_8_bit

public static final ColorTransformer.ColorTransformMethod DAB_H_DAB_8_bit

DAB after color deconvolution with default H-DAB stains and conversion to 8-bit

Red_chromaticity

public static final ColorTransformer.ColorTransformMethod Red_chromaticity

Red chromaticity value, red / max(1, red + green + blue)

Green_chromaticity

public static final ColorTransformer.ColorTransformMethod Green_chromaticity

Green chromaticity value, green / max(1, red + green + blue)

Blue_chromaticity

public static final ColorTransformer.ColorTransformMethod Blue_chromaticity

Blue chromaticity value, blue / max(1, red + green + blue)

Green_divided_by_blue

public static final ColorTransformer.ColorTransformMethod Green_divided_by_blue

Green value divided by blue value

OD_Normalized

public static final ColorTransformer.ColorTransformMethod OD_Normalized

RGB values normalized to OD vector (to reduce intensity information)

Brown

public static final ColorTransformer.ColorTransformMethod Brown

Brown value, (blue - (red + green)*0.3f)

White

public static final ColorTransformer.ColorTransformMethod White

All pixels white

Black

public static final ColorTransformer.ColorTransformMethod Black

All pixels black

Method Details

values

public static ColorTransformer.ColorTransformMethod[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static ColorTransformer.ColorTransformMethod valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null

toString

public String toString()

Overrides:

toString in class Enum<ColorTransformer.ColorTransformMethod>