OMEPyramidWriterCommand (QuPath 0.5.0)

java.lang.Object

qupath.lib.images.writers.ome.OMEPyramidWriterCommand

All Implemented Interfaces:: Runnable

public class OMEPyramidWriterCommand extends Object implements Runnable

OME TIFF writer command capable of exporting image pyramids based on QuPath ImageServers.

Note this requires Bio-Formats v6.0.0 or later.

Author:: Pete Bankhead

Constructor Summary

Constructors

Constructor

Description

OMEPyramidWriterCommand(QuPathGUI qupath)

Constructor.
Method Summary

Modifier and Type

Method

Description

static OMEPyramidWriter.CompressionType

getDefaultPyramidCompression()

Query the default compression type when writing OME-TIFF images.

static int

getDefaultTileSize()

Query the default tile size when writing OME-TIFF images.

static int

getMinSizeForTiling()

Query the default minimum image size when writing OME-TIFF images.

void

run()

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- OMEPyramidWriterCommand
  
  public OMEPyramidWriterCommand(QuPathGUI qupath)
  
  Constructor.
  
  Parameters:
  
  qupath - current QuPath instance.
Method Details
- getDefaultPyramidCompression
  
  public static OMEPyramidWriter.CompressionType getDefaultPyramidCompression()
  
  Query the default compression type when writing OME-TIFF images.
  
  Returns:
- getDefaultTileSize
  
  public static int getDefaultTileSize()
  
  Query the default tile size when writing OME-TIFF images.
  
  Returns:
- getMinSizeForTiling
  
  public static int getMinSizeForTiling()
  
  Query the default minimum image size when writing OME-TIFF images. This is used as a hint to disable tiling for images with widths and heights smaller than this value.
  
  Returns:
- run
  
  public void run()
  
  Specified by:
  
  run in interface Runnable