Package qupath.lib.images.writers.ome

Class OMEPyramidWriter.OMEPyramidSeries

java.lang.Object

qupath.lib.images.writers.ome.OMEPyramidWriter.OMEPyramidSeries

Enclosing class:

OMEPyramidWriter

public static class OMEPyramidWriter.OMEPyramidSeries
extends Object

Class representing a single series to write to an OME-TIFF.

Method Summary

Modifier and Type	Method	Description
void	writePyramid(String path)	Deprecated. use writeSeries(String) instead
void	writePyramid(PyramidOMETiffWriter writer, IMetadata meta, int series)	Deprecated. use writeSeries(IFormatWriter, IMetadata, int) instead
void	writeSeries(String path)	Write an image to the given file.
void	writeSeries(IFormatWriter writer, IMetadata meta, int series)	Append an image as a specific series.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

writePyramid

@Deprecated
public void writePyramid(String path)
                  throws FormatException,
IOException

Deprecated.

use writeSeries(String) instead

Write an OME-TIFF pyramidal image to the given file.

Parameters:

path - file path for output

Throws:

FormatException

IOException

writeSeries

public void writeSeries(String path)
                 throws FormatException,
IOException

Write an image to the given file.

Parameters:

path - file path for output

Throws:

FormatException

IOException

writePyramid

@Deprecated
public void writePyramid(PyramidOMETiffWriter writer,
 IMetadata meta,
 int series)
                  throws FormatException,
IOException

Deprecated.

use writeSeries(IFormatWriter, IMetadata, int) instead

Append an image as a specific series to a pyramidal OME TIFF.

Parameters:

writer - the current writer; it should already be initialized, with metadata and ID set

meta - the metadata, which should already have been initialized and set in the writer before writing any pixels

series - number of series to be written (starting with 0; assumes previous series already written)

Throws:

FormatException

IOException

See Also:

• OMEPyramidWriter.Builder
• initializeMetadata(IMetadata, int)

writeSeries

public void writeSeries(IFormatWriter writer,
 IMetadata meta,
 int series)
                 throws FormatException,
IOException

Append an image as a specific series.

Parameters:

writer - the current writer; it should already be initialized, with metadata and ID set

meta - the metadata, which should already have been initialized and set in the writer before writing any pixels

series - number of series to be written (starting with 0; assumes previous series already written)

Throws:

FormatException

IOException

See Also:

• OMEPyramidWriter.Builder
• initializeMetadata(IMetadata, int)